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Gluconacetobacter diazotrophicus (Gillis et al.) Yamada et al.

49037

Download Genome Learn about the ATCC Genome Portal
Type strain. Genome sequenced strain.
Product category
Bacteria
Strain designation
PA1 5 [LMG 7603, CCUG 37298, CIP 103539, DSM 5601, NCCB 89154]
Type strain
Yes
Genome sequenced strain
Yes
Isolation source
Sugarcane roots
Geographical isolation
Brazil; Alagoas
Applications
Bioinformatics
Agricultural research
Product format
Freeze-dried
Storage conditions
2°C to 8°C
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Limited inventory

Documentation

ATCC determines the biosafety level of a material based on our risk assessment as guided by the current edition of Biosafety in Microbiological and Biomedical Laboratories (BMBL), U.S. Department of Health and Human Services. It is your responsibility to understand the hazards associated with the material per your organization’s policies and procedures as well as any other applicable regulations as enforced by your local or national agencies.

ATCC highly recommends that appropriate personal protective equipment is always used when handling vials. For cultures that require storage in liquid nitrogen, it is important to note that some vials may leak when submersed in liquid nitrogen and will slowly fill with liquid nitrogen. Upon thawing, the conversion of the liquid nitrogen back to its gas phase may result in the vial exploding or blowing off its cap with dangerous force creating flying debris. Unless necessary, ATCC recommends that these cultures be stored in the vapor phase of liquid nitrogen rather than submersed in liquid nitrogen.

Detailed product information

General

Specific applications

Potential plant growth promoting strain; Biofertilizer

Preceptrol
No

Characteristics

Comments
Genome sequenced strain

Handling information

Medium
Temperature
30°C
Atmosphere
Aerobic
Handling procedure
  1. Open vial according to enclosed instructions or visit www.atcc.org for instructions.
  2. Rehydrate the entire pellet with approximately 0.5 mL of #1 broth. Aseptically transfer the entire contents to a 5-6 mL tube of #1 broth. Additional test tubes can be inoculated by transferring 0.5 mL of the primary broth tube to these secondary tubes.
  3. Use several drops of the primary broth tube to inoculate a #1 plate and/or #1 agar slant.
  4. Incubate at 30°C for 24-72 hours.
Handling notes
Purified genomic DNA of this strain is available as ATCC® 49037D-5™.
Additional information on this culture is available on the ATCC® web site at www.atcc.org.

Quality control specifications

Verification method
Whole-genome Sequencing

History

Deposited as
Acetobacter diazotrophicus Gillis et al.
Depositors
J Dobereiner
Type of isolate
Plant
Cross references
GenBank AM889285 Gluconacetobacter diazotrophicus PAl 5 complete genome
GenBank AM889286 Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIPal5II, complete sequence
GenBank AM889287 Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIPal5I, complete sequence
GenBank CP001189 Gluconacetobacter diazotrophicus PAl 5, complete genome
GenBank CP001190 Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIA01, complete sequence

Legal disclaimers

Intended use
This product is intended for laboratory research use only. It is not intended for any animal or human therapeutic use, any human or animal consumption, or any diagnostic use.
Warranty

The product is provided 'AS IS' and the viability of ATCC® products is warranted for 30 days from the date of shipment, provided that the customer has stored and handled the product according to the information included on the product information sheet, website, and Certificate of Analysis. For living cultures, ATCC lists the media formulation and reagents that have been found to be effective for the product. While other unspecified media and reagents may also produce satisfactory results, a change in the ATCC and/or depositor-recommended protocols may affect the recovery, growth, and/or function of the product. If an alternative medium formulation or reagent is used, the ATCC warranty for viability is no longer valid.  Except as expressly set forth herein, no other warranties of any kind are provided, express or implied, including, but not limited to, any implied warranties of merchantability, fitness for a particular purpose, manufacture according to cGMP standards, typicality, safety, accuracy, and/or noninfringement.

Disclaimers

This product is intended for laboratory research use only. It is not intended for any animal or human therapeutic use, any human or animal consumption, or any diagnostic use. Any proposed commercial use is prohibited without a license from ATCC.

While ATCC uses reasonable efforts to include accurate and up-to-date information on this product sheet, ATCC makes no warranties or representations as to its accuracy. Citations from scientific literature and patents are provided for informational purposes only. ATCC does not warrant that such information has been confirmed to be accurate or complete and the customer bears the sole responsibility of confirming the accuracy and completeness of any such information.

This product is sent on the condition that the customer is responsible for and assumes all risk and responsibility in connection with the receipt, handling, storage, disposal, and use of the ATCC product including without limitation taking all appropriate safety and handling precautions to minimize health or environmental risk. As a condition of receiving the material, the customer agrees that any activity undertaken with the ATCC product and any progeny or modifications will be conducted in compliance with all applicable laws, regulations, and guidelines. This product is provided 'AS IS' with no representations or warranties whatsoever except as expressly set forth herein and in no event shall ATCC, its parents, subsidiaries, directors, officers, agents, employees, assigns, successors, and affiliates be liable for indirect, special, incidental, or consequential damages of any kind in connection with or arising out of the customer's use of the product. While reasonable effort is made to ensure authenticity and reliability of materials on deposit, ATCC is not liable for damages arising from the misidentification or misrepresentation of such materials.

Please see the material transfer agreement (MTA) for further details regarding the use of this product. The MTA is available at www.atcc.org.

Permits & Restrictions

Import Permit for the State of Hawaii

If shipping to the U.S. state of Hawaii, you must provide either an import permit or documentation stating that an import permit is not required. We cannot ship this item until we receive this documentation. Contact the Hawaii Department of Agriculture (HDOA), Plant Industry Division, Plant Quarantine Branch to determine if an import permit is required.

MORE INFORMATION ABOUT PERMITS AND RESTRICTIONS

Frequently Asked Questions

References

Curated Citations

Gillis M, et al. Acetobacter diazotrophicus sp. nov., a nitrogen-fixing acetic acid bacterium associated with sugarcane. Int. J. Syst. Bacteriol. 39: 361-364, 1989.

Gillis M, et al. Erratum: Acetobacter diazotrophicus sp. nov., a nitrogen-fixing acetic acid bacterium associated with sugarcane. Int. J. Syst. Bacteriol. 39: 502, 1989.

Validation list no. 64. Int. J. Syst. Bacteriol. 48: 327-328, 1998.

Yamada Y, et al. The phylogeny of acetic acid bacteria based on the partial sequences of 16S ribosomal RNA: the elevation of the subgenus Gluconoacetobacterium to generic level. Biosci. Biotechnol. Biochem. 61: 1244-1251, 1997. PubMed: 9301103

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